BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D02LP1|AL428708
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1534 0.0
>3x_Contig1721
Length = 17834
Score = 1534 bits (774), Expect = 0.0
Identities = 870/888 (97%), Gaps = 12/888 (1%)
Strand = Plus / Plus
Query: 1 gatcgtgtccccttatttcttagttcttatgtatcgatgttccttttaacgatttcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gatcgtgtccccttatttcttagttcttatgtatcgatgttccttttaacgatttcaaaa 577
Query: 61 tcaaatctttgggtccactgctgccaagaaattcaacatcactcgaaattgacaaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tcaaatctttgggtccactgctgccaagaaattcaacatcactcgaaattgacaaaaaga 637
Query: 121 gaagagagtaaaccaccttgttaacttccatcgttgaacattttctaaagtcctccagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gaagagagtaaaccaccttgttaacttccatcgttgaacattttctaaagtcctccagac 697
Query: 181 tatgatgtacacacgtcttctatatgcattgtttttgttggtcgaactggcgttcggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tatgatgtacacacgtcttctatatgcattgtttttgttggtcgaactggcgttcggagc 757
Query: 241 caatttctacgaccgtgatgagaatatcatggaattgacaccttctaacttcgataaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 caatttctacgaccgtgatgagaatatcatggaattgacaccttctaacttcgataaagt 817
Query: 301 cattcataggaccaattacaccactttggtcatgttttatgctccgtggtgtggttactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 cattcataggaccaattacaccactttggtcatgttttatgctccgtggtgtggttactg 877
Query: 361 tcaggaattgaaa-ggttccatgaaatctgccggtaaaatcctctctggaatggtacaag 419
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tcaggaattgaaaaggttccatgaaatctgccggtaaaatcctctctggaatggtacaag 937
Query: 420 ttgctggagtgaactgtgatgaaagtgtgaataaacaattatgtgcacagaacagagtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 ttgctggagtgaactgtgatgaaagtgtgaataaacaattatgtgcacagaacagagtat 997
Query: 480 c-ggggttcccaa-cgttaatggta-ttcagg-cctccaaa--gat-caatt-tggataa 531
| ||||||||| | ||||| ||||| |||||| |||||||| ||| ||||| |||||||
Sbjct: 998 ccggggttccccagcgttagtggtagttcaggacctccaaaaggattcaattatggataa 1057
Query: 532 cccaaagaaaaa-ttccaatggtgctgcgtc-ac-agcatgccacagaagtgtacaaggg 588
|||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1058 cccaaagaaaaaattccaatggtgctgcgtctactagcatgccacagaagtgtacaaggg 1117
Query: 589 agaaaggaaattgaagcccattgtcgatttcgctttatctagagtgaaaaactacgtgaa 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 agaaaggaaattgaagcccattgtcgatttcgctttatctagagtgaaaaactacgtgaa 1177
Query: 649 gcggttgaaccgttacagtaagttcgaagactanttaaaatcttcaagaaccaggtacgc 708
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1178 gcggttgaaccgttacagtaagttcgaagaactattaaaatcttcaagaaccaggtacgc 1237
Query: 709 tgtagtgcttatctcaaagaaggagaagattccaactttatataaatctgtagccctcga 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 tgtagtgcttatctcaaagaaggagaagattccaactttatataaatctgtagccctcga 1297
Query: 769 ttggcttgggatctacgatttctattcgatctgggacgagaaattgcaaggcgtgtcaca 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 ttggcttgggatctacgatttctattcgatctgggacgagaaattgcaaggcgtgtcaca 1357
Query: 829 attgagttttgagaacgatacaaagaattggccaaatactgttaaata 876
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 attgagttttgagaacgatacaaagaattggccaaatactgttaaata 1405
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6934
Number of Sequences: 1807
Number of extensions: 6934
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)